BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E12SP1|AL424987
(1032 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig402 1975 0.0
>3x_Contig402
Length = 1546
Score = 1975 bits (995), Expect = 0.0
Identities = 1004/1007 (99%), Gaps = 1/1007 (0%)
Strand = Plus / Minus
Query: 1 aattgcttgactcgattgatgtaaactttgattgtctcttcccctaaagagtgtactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 aattgcttgactcgattgatgtaaactttgattgtctcttcccctaaagagtgtactgca 948
Query: 61 aggaagcaaatcggtaaatcaatacacgataatcccaaataaacacctaaagcagaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 aggaagcaaatcggtaaatcaatacacgataatcccaaataaacacctaaagcagaccat 888
Query: 121 ccgtactgttttattaatttcttcaaaccagttggctctttaacagtagctttacccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 ccgtactgttttattaatttcttcaaaccagttggctctttaacagtagctttacccttc 828
Query: 181 aaattctgcgcataagctcttcttatgattggattaaatccatattttggcccagtttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 aaattctgcgcataagctcttcttatgattggattaaatccatattttggcccagtttta 768
Query: 241 agcccaattctagtagtaaacttgaacatttaacacaaattcgtctttatcgtaaatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 agcccaattctagtagtaaacttgaacatttaacacaaattcgtctttatcgtaaatgag 708
Query: 301 aacgatacctgtcgatcaatcaatgtactaaagataccagctcgctaccactaaagaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aacgatacctgtcgatcaatcaatgtactaaagataccagctcgctaccactaaagaatc 648
Query: 361 tatatactggaagttatctatctctttgatagatggcaagaatgttattaactcgcttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tatatactggaagttatctatctctttgatagatggcaagaatgttattaactcgcttag 588
Query: 421 tctttacgaatatgtttgavaaattccatctgatgttccttcgtaattaagaaaactagc 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tctttacgaatatgtttgaaaaattccatctgatgttccttcgtaattaagaaaactagc 528
Query: 481 gtcagtttgaacaaaaagtgataaagacagaagaaaggaagtgattgaacacgtcatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtcagtttgaacaaaaagtgataaagacagaagaaaggaagtgattgaacacgtcatgag 468
Query: 541 atattctgcatataatattagattgataatatttaccaatataaataattatatcagcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atattctgcatataatattagattgataatatttaccaatataaataattatatcagcat 408
Query: 601 gattacaagactcaaaccaactgggcaggaaggttaaagtatgtaacagtatcagcacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gattacaagactcaaaccaactgggcaggaaggttaaagtatgtaacagtatcagcacaa 348
Query: 661 aaataaatggtatgggagttgaaaaaccagctggaatctccttcggttgagcctcatcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aaataaatggtatgggagttgaaaaaccagctggaatctccttcggttgagcctcatcaa 288
Query: 721 agttcggccatcgactcaaaagtagaagggttggattaattaccagtggtgtgagaaacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 agttcggccatcgactcaaaagtagaagggttggattaattaccagtggtgtgagaaacc 228
Query: 781 gtttaatatttcactcttttccttcttttttgactcaaactagtaaaaccatgtagttct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gtttaatatttcactcttttccttcttttttgactcaaactagtaaaaccatgtagttct 168
Query: 841 gcaataggagaagacaccaatcaccagataacaagcgttgatgtgtattcgtcataatca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gcaataggagaagacaccaatcaccagataacaagcgttgatgtgtattcgtcataatca 108
Query: 901 tcggtaacacaatcagaaacatatgtaatagattggtatacttcagtgattccgatgaaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tcggtaacacaatcagaaacatatgtaatagattggtatacttcagtgattccgatgaaa 48
Query: 961 gtttctccgttggaagtcattgttcttgttcttgtagagatcggrgt 1007
||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 47 gtttctccgttggaagtcattgttc-tgttcttgtagagatcggagt 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8526
Number of Sequences: 1807
Number of extensions: 8526
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 1032
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1016
effective length of database: 10,329,639
effective search space: 10494913224
effective search space used: 10494913224
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)